diagrid FORGE

Tool Development

Welcome to diagrid FORGE, the tool development area of diagrid. The following pages are maintained by the various owners of each tool. Many of these tools are available as Open Source, and you can download the code via Subversion from this site. Some tools are closed source at the request of the authors, and only a restricted development team has access to the code. See each tool page for details.

Available Tools

Title Alias Status
3 Player Rock-Paper-Scissors 3prps closed source
A web version of Anusplin anusplinpro closed source
Avida avida open source
BEAST on Diagrid: Bayesian Evolutionary... beast open source
bitc bitc closed source
BLASTer blastgui closed source
CESM cesm closed source
Common Filesystem Access cfa open source
Yang's codeml program form PAML package codeml open source
Demo Analytic Tool for FRESCO data repository cridemo closed source
Single Particle Cryo-EM 3-D Reconstruction cryoem closed source
Erich's Tool erichs closed source
File Transfer filebrowser closed source
GAHMMC gahmmc open source
Grace grace open source
GROMACSIMUM gromacsimum closed source
Hammock hammock closed source
hubcheck parameter passing tool hppt open source
Interactive Parallelization Tool (IPT) ipt closed source
Job Manager jobmanager open source
Jpdbviewer jpdbviewer closed source
Jupyter Notebook jupyter open source
LAMMPS - Large-scale Atomic/Molecular Massively... lammps closed source
MyTool mytool open source
NAMDD namdd closed source
Human POLII promoters 9-mers Database Search ninemersdata closed source
Nonlinear Adjoint-based Coefficient Estimator -... nlacedev closed source
Octave on Diagrid: A high-level interpreted... octaved closed source
OpenSEES - Open System for Earthquake... opensees closed source
OpenSees Example Utility openseesexample open source
ParaView paraview open source
Pegasus Workflow Management System pegasus closed source
Pegasus Tutorial pegtut open source
LSST Photon Simulation phosim closed source
PolyRun polyrun closed source
Submit_PowerFLOW powerflow closed source
PyGromacsimum pygromacsimum open source
PyMOL pymol closed source
PySubmitLib pysubmitlib closed source
RStudio rstudio open source
Scilab scilab open source
Spyder on DiaGrid spyderplugin open source
ST-analyzer stanalyzer open source
SubmitR submitr closed source
SuperPower superpower closed source
Submit Gui thesubmitgui open source
Virtual brain virtualbrain open source
VMD vmd open source
Terrestrial Ecosystem Model webtem closed source
WebTem 2.0 webtem2 open source
Workspace workspace closed source
Workspace Beta workspacebeta closed source